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MRS

http://mrs.cmbi.ru.nl/

Description :
MRS is a biological data retrieval system that can be accessed over the web, or installed and used locally. MRS indexes several flat-file data sets for searching, including EMBL nucleotide, UniProt, PDB and KEGG. Searches can be performed globally, or on one or more flat file fields per data set.

NCBI Human DNA Reference Sequence

http://www.ncbi.nlm.nih.gov/genome/seq/

Description :
Downloadable human DNA reference sequence. Annotation of genes and other genomic features will be available for browsing when complete.

PubCrawler

http://pubcrawler.gen.tcd.ie/

Description :
It goes to the library. You go to the pub; receive email alerts for current contents of PubMed and GenBank; e.g. use accession number of htg record as query to receive sequence updates (as the version number changes).

SAKURA

http://sakura.ddbj.nig.ac.jp/

Description :
SAKURA is the DDBJ DNA Database Submission System.

SeqHound

http://seqhound.blueprint.org/

Description :
Seqhound is a sequence retrieval system that provides access to biological sequence, structure and functional annotation data. Seqhound can be accessed via the web interface, through the remote API, or by installing locally.

Swiss-Shop

http://us.expasy.org/swiss-shop/

Description :
Submit sequence, pattern or keywords to receive email alert when new sequences of interest appear in SwissProt.

WEBIN

http://www.ebi.ac.uk/embl/Submission/webin.html

Description :
WEBIN is the internet tool for the submission of nucleotide sequences to the EMBL database. It is a service offered by the European Bioinformatics Institute (EBI), an outstation of the European Molecular Biology Laboratory.

YOGY

http://www.sanger.ac.uk/PostGenomics/S_pombe/YOGY/

Description :
Eukaryotic Orthology (YOGY) is a resource for retrieving orthologous proteins from nine eukaryotic organisms. Using a gene or protein identifier as a query, this database provides comprehensive, combined information on orthologs in other species using data from five independent resources: KOGs, Inparanoid, Homologene, OrthoMCL, and a table of curated orthologs between budding yeast and fission yeast. Associated Gene Ontology (GO) terms of orthologs can also beretrieved.

BCM Search Launcher

http://searchlauncher.bcm.tmc.edu/

Description :
Molecular biology-related search and analysis services organized by function; single point-of-entry for related searches (e.g., a single page for launching protein sequence searches using standard parameters).

SIRW

http://sirw.embl.de/

Description :
SIRW is a web interface to SIR (Simple Indexing and Retrieval System). It combines the ability to search protein/nucleotide databases with keywords and a sequence motif.

PIR - Protein Information Resource

http://pir.georgetown.edu/

Description :
PIR is an integrated bioinformatics resource. The Protein Sequence Database (PSD), a functionally annotated database of protein sequences, is located at PIR.

Swiss-Prot and TrEMBL

http://us.expasy.org/sprot/

Description :
Swiss-Prot is a curated database of protein sequences that are highly annotated and have a minimal level of redundancy. TrEMBL is a supplement to Swiss-Prot, containing computer-annotated translations of EMBL sequences.

UniProt

http://www.pir.uniprot.org/

Description :
The mission of UniProt (Universal Protein Resource) is to provide the scientific community with a comprehensive, high-quality and freely accessible resource of protein sequence and functional information.

BLAST2SRS

http://blast2srs.embl.de/

Description :
BLAST2SRS (Sequence Retrieval System) is a tool to retrieve protein sequences using similarity (BLAST) and keyword searches.

FASTA Programs

http://fasta.bioch.virginia.edu/

Description :
Sequence retrieval and comparison tools.

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