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Berkeley Phylogenomics Group

Location :University of California Berkeley, Berkeley, California, USA.

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Phylogenomic analysis of protein or gene function is a form of functional genomics, designed to improve the accuracy of predicted molecular function by integrating evolutionary tree construction and analysis in the annotation pipeline. We combine phylogenomic approaches with protein structure prediction to elucidate the correlation between changes in protein structure and changes in molecular function.

Principal directions:

  • Algorithm development for protein functional, structural and phylogenetic analysis.
  • Algorithm deployment in collaboration with experimental biologists.
  • Phylogenomic analysis platform development for the scientific community.